The detailed information of tRNA gene sequence


Sequence ID>WENV180097877
Genome IDMTBK01216099
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 223
End posion on genome 141
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgaccatttt
tRNA gene sequence 
GGAGGAGTGGCAGAATGGTAATGCGCCAGTCTTGAAAACTGGTGCCCGTAAGGGCTTGCA
GGTTCGAGTCCTGTCTCCTCCGCtt
Downstream region at tRNA end position 
attttattta
Secondary structure (Cloverleaf model)
>WENV180097877	Ser	TGA
                   t      GCtt attttattta
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     T G T C C     A
        A A        G      + | | | |     G
      T     G A C G       G C A G G     C
      G       | | |                 T T
      G     A T G C
        T A        G     TGCCCGTAAGGGCTT
                    C - G
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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