The detailed information of tRNA gene sequence


Sequence ID>WENV180097895
Genome IDMTBK01217542
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 5263
End posion on genome 5174
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
taacaacaaa
tRNA gene sequence 
GGAGGAGTGCCTGAGTGGTTGAAAGGGACGGTCTTGAAAACCGTTAGGTCGGAAACGGCC
TCGTGAGTTCGAATCTCACCTCCTCCGCCA
Downstream region at tRNA end position 
gtcaaaattt
Secondary structure (Cloverleaf model)
>WENV180097895	Ser	TGA
                   a      GCCA gtcaaaattt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G T C C       G T G A G     C
    G         | | |                 T T
    T       A A G G
      T G A        G     TAGGTCGGAAACGGCCTC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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