The detailed information of tRNA gene sequence


Sequence ID>WENV180097897
Genome IDMTBK01217650
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 46
End posion on genome 120
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ccaagcaaat
tRNA gene sequence 
GGTCTCGTAGCGCAGTTGGTTAGCGCGCCGGCCTGTCAAGCCGGAGGTCGCGGGTTCAAG
TCCCGTCGGGACCGCtc
Downstream region at tRNA end position 
cgcggttcgt
Secondary structure (Cloverleaf model)
>WENV180097897	Asp	GTC
                   t      GCtc cgcggttcgt
                     G - C
                     G - C
                     T - A
                     C - G
                     T + G
                     C - G
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     A
    T       C G C G       G C G G G     C
    G       | | | |                 T T
    G       G C G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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