The detailed information of tRNA gene sequence


Sequence ID>WENV180097900
Genome IDMTBK01217834
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 310
End posion on genome 221
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tttagcttgc
tRNA gene sequence 
GGAGAGTTGCCGGAGCGGTTGAACGGGGCGGTCTCGAAAACCGTTGTATCCTCGCGGGTA
CCCAGGGTTCGAATCCCTGACTCTCCGCCA
Downstream region at tRNA end position 
ctattattag
Secondary structure (Cloverleaf model)
>WENV180097900	Ser	CGA
                   c      GCCA ctattattag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     G T C C C     A
      C G A        G      | | | | |     G
    G       G G C C       C A G G G     C
    G         | | |                 T T
    T       A C G G
      T G A        G     TGTATCCTCGCGGGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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