The detailed information of tRNA gene sequence


Sequence ID>WENV180097901
Genome IDMTBK01217837
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 781
End posion on genome 706
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
tcaaaagtgt
tRNA gene sequence 
GGCGAGATAGCTCAGTCGGTAGAGCAGAGGCCTGAAAAGCCTTGTGTCCCCAGTTCGATT
CTGGGTTTCGCCACCA
Downstream region at tRNA end position 
ttttttgtat
Secondary structure (Cloverleaf model)
>WENV180097901	Phe	GAA
                   t      ACCA ttttttgtat
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G + T
                     A - T          T T
                    T     G G G T C     A
      T G A        A      | | | | |     G
    C       C T C G       C C C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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