The detailed information of tRNA gene sequence


Sequence ID>WENV180097902
Genome IDMTBK01217883
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 362
End posion on genome 288
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position
gcaatcattt
tRNA gene sequence
GGGGTATTAGCTCAGTTGGCTAGAGCACCAGTATCGCACACTGGAGGTCATCGGTTCAAA
TCCGATATACTCCACtc
Downstream region at tRNA end position
atattatggt
Secondary structure (Cloverleaf model)
>WENV180097902	Ala	CGC
                   t      ACtc atattatggt
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     A - T
                     T - A          T A
                    T     T A G C C     A
      T G A        A      | | | | |     A
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    T - A
                  A       C
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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