The detailed information of tRNA gene sequence


Sequence ID>WENV180097913
Genome IDMTBK01218343
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1234
End posion on genome 1143
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cctgtataaa
tRNA gene sequence 
GGAGAGGTGCCTGAGTGGTCGAAAGGAACTCACTGCTAACGAGTCGTAGATCTAAAAGTC
TACCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tattttatcc
Secondary structure (Cloverleaf model)
>WENV180097913	Ser	GCT
                   a      GCCA tattttatcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C C       G A G G G     C
    G         | | |                 T T
    T       A A G G
      C G A        A     CGTAGATCTAAAAGTCTACC
                    A - T
                    C - G
                    T - A
                    C - G
                    A   C
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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