The detailed information of tRNA gene sequence


Sequence ID>WENV180097914
Genome IDMTBK01218428
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 398
End posion on genome 325
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gcggacggac
tRNA gene sequence 
GGCCTCGTGGCGGAGTGGCTACGCAGAGGACTGCAAATCCTTGTACGGGGGTTCGATTCC
CTCCGAGGCCTCCA
Downstream region at tRNA end position 
cagatttcca
Secondary structure (Cloverleaf model)
>WENV180097914	Cys	GCA
                   c      TCCA cagatttcca
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C          T T
                    T     C T C C C     A
        G A        G      | + | | |     G
      T     G G C G       G G G G G     C
      G       | | |                 T T
      G     A C G C
        C T        A     GTAC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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