The detailed information of tRNA gene sequence


Sequence ID>WENV180097919
Genome IDMTBK01218557
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 63
End posion on genome 136
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
aaattatcat
tRNA gene sequence 
CGCGGGATAGAGCAGTTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGTTGGTTCGAAT
CCAGCTCCCGCTACta
Downstream region at tRNA end position 
aggccctatg
Secondary structure (Cloverleaf model)
>WENV180097919	fMet	CAT
                   t      ACta aggccctatg
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G A C C     A
      T G A        A      | + | | |     G
    T       C G A G       G T T G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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