The detailed information of tRNA gene sequence


Sequence ID>WENV180097922
Genome IDMTBK01218557
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 320
End posion on genome 396
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ataaaattgc
tRNA gene sequence 
GGCCTGGTAGTTCAGCCGGTTAGAATGCCAGCCTGTCACGCTGGAGGTCGTGGGTTCGAG
CCCCATCCAGGTCGCCA
Downstream region at tRNA end position 
aaactaagga
Secondary structure (Cloverleaf model)
>WENV180097922	Asp	GTC
                   c      GCCA aaactaagga
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     G - C
                     G - C          C G
                    T     T A C C C     A
      C G A        A      + | | | |     G
    C       C T T G       G T G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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