The detailed information of tRNA gene sequence


Sequence ID>WENV180097926
Genome IDMTBK01218635
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 11677
End posion on genome 11601
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
tttccgcgag
tRNA gene sequence 
GTGGGTGTAGCTCAGCAGGTTAGAGCGCCAGGTTGTGGCCCTGGAGGTCGTGGGTTCGAG
TCCCATCACTCACCCCA
Downstream region at tRNA end position 
tttttttatc
Secondary structure (Cloverleaf model)
>WENV180097926	His	GTG
                   g      CCCA tttttttatc
                     G - C
                     T - A
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T A C C C     A
      C G A        A      + | | | |     G
    A       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       C
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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