The detailed information of tRNA gene sequence


Sequence ID>WENV180097932
Genome IDMTBK01218993
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 512
End posion on genome 438
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
tcggggcagc
tRNA gene sequence 
GGGGCGTTAGCTCAGTCGGTCAGAGCAGCGGACTCATAATCCGTCGGTCGTCGGTTCAAG
CCCGACACACCCCACgt
Downstream region at tRNA end position 
atcaattggg
Secondary structure (Cloverleaf model)
>WENV180097932	Ile2	CAT
                   c      ACgt atcaattggg
                     G - C
                     G - C
                     G - C
                     G - C
                     C   A
                     G - C
                     T - A          C G
                    T     C A G C C     A
      T G A        A      | | | | |     A
    C       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     CGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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