The detailed information of tRNA gene sequence


Sequence ID>WENV180097945
Genome IDMTBK01219974
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 432
End posion on genome 357
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
aacttaatat
tRNA gene sequence 
CGCGGGGTGGAGCAGTTGGCAGCTCGTCGGGCTCATAACCCGAAGGTCGTAGGTTCAAGT
CCTGCCCCCGCAACCA
Downstream region at tRNA end position 
tcatggcgga
Secondary structure (Cloverleaf model)
>WENV180097945	fMet	CAT
                   t      ACCA tcatggcgga
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C G T C C     A
      T G A        G      | + | | |     A
    T       C G A G       G T A G G     C
    G       | | | |                 T T
    G       G C T C
      C A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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