The detailed information of tRNA gene sequence


Sequence ID>WENV180097948
Genome IDMTBK01220053
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 76
End posion on genome 162
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgtttttttt
tRNA gene sequence 
GGAGAGATGTCCGAGTGGTTGAAGGTGTACGCTTGGAAAGCGTATGTGCCCAAAAGGTAC
CGAGGGTTCGAATCCCTCTCTCTCCGCta
Downstream region at tRNA end position 
ttcccccgta
Secondary structure (Cloverleaf model)
>WENV180097948	Ser	GGA
                   t      GCta ttcccccgta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | |                   T T
    T       A G G T
      T G A        G     TGTGCCCAAAAGGTACC
                    T - A
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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