The detailed information of tRNA gene sequence


Sequence ID>WENV180097954
Genome IDMTBK01220368
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 317
End posion on genome 391
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ataaagctac
tRNA gene sequence 
GGGGATATAGCTCAGTTGGCTAGAGCACCTGCTTTGCAAGCAGGGGGTCGTCGGTTCGAC
TCCGTCTATCTCCACaa
Downstream region at tRNA end position 
aaggcgcgtt
Secondary structure (Cloverleaf model)
>WENV180097954	Ala	TGC
                   c      ACaa aaggcgcgtt
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     A - T          T C
                    T     C T G C C     A
      T G A        A      |   | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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