The detailed information of tRNA gene sequence


Sequence ID>WENV180097963
Genome IDMTBK01220384
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 890
End posion on genome 820
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttataataat
tRNA gene sequence 
GGCGGTATAGCCAAGTGGTAAGGCAGAGGTCTGCAAAACCTTCATCACCGGTTCAAATCC
GGTTACCGCCTtag
Downstream region at tRNA end position 
tacaataaat
Secondary structure (Cloverleaf model)
>WENV180097963	Cys	GCA
                   t      Ttag tacaataaat
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     T G G C C     A
        G A        A      | | | | |     A
      T     A C C G       A C C G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     CATC
                    G + T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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