The detailed information of tRNA gene sequence


Sequence ID>WENV180097981
Genome IDMTBK01221323
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 499
End posion on genome 425
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ttgaacgact
tRNA gene sequence 
GGCCCCTTCGTCTAACGGCTAGGACACCGCTCTTTCAAGGCGGCGGCAGGGGTTCGATTC
CCCTAGGGGCTACCA
Downstream region at tRNA end position 
aatatgtcgg
Secondary structure (Cloverleaf model)
>WENV180097981	Glu	TTC
                   t      ACCA aatatgtcgg
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T C C C C     A
      C A A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      T A          A     CGGC
                    C - G
                    C - G
                    G - C
                    C - G
                    T + G
                  C       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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