The detailed information of tRNA gene sequence


Sequence ID>WENV180097996
Genome IDMTBK01222226
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2279
End posion on genome 2353
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tcggccttcc
tRNA gene sequence 
GGGCGGTTAGCTCAGCGGTAGAGCACTGCCTTCACACGGCAGGGGTCACTGGTTCGAAAC
CAGTACCGCCCACCA
Downstream region at tRNA end position 
gcatcagcgg
Secondary structure (Cloverleaf model)
>WENV180097996	Val	CAC
                   c      ACCA gcatcagcgg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          A A
                    T     T G A C C     A
        G A        A      | | | | |     G
      C     C T C G       A C T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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