The detailed information of tRNA gene sequence


Sequence ID>WENV180098002
Genome IDMTBK01222589
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 399
End posion on genome 474
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
ttctgtttta
tRNA gene sequence 
GGGAGTATAGCTCAGTCGGTAGAGCGCGGTTCTTATAAAGCCGTGGTCGATGGTTCGATT
CCATCTGCTCCCACCA
Downstream region at tRNA end position 
tctaaatttg
Secondary structure (Cloverleaf model)
>WENV180098002	Ile	TAT
                   a      ACCA tctaaatttg
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     A - T          T T
                    T     C T A C C     A
      T G A        A      | | | | |     G
    C       C T C G       G A T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     TGGTC
                    C - G
                    G - C
                    G - C
                    T + G
                    T - A
                  C       A
                  T       A
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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