The detailed information of tRNA gene sequence


Sequence ID>WENV180098003
Genome IDMTBK01222589
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2387
End posion on genome 2461
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
tagttaatat
tRNA gene sequence 
CGCGGGGTAGAGCAGTGGCAGCTCGTCAGGCTCATAACCTGAAGGACGTTGGTTCGAATC
CAACCCCCGCAACCA
Downstream region at tRNA end position 
ttttcatttt
Secondary structure (Cloverleaf model)
>WENV180098003	fMet	CAT
                   t      ACCA ttttcatttt
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A A C C     A
        G A        A      | | | | |     G
      T     C G A G       G T T G G     C
      G     | | | |                 T T
      G     G C T C
        C A        G     AGGAC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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