The detailed information of tRNA gene sequence


Sequence ID>WENV180098005
Genome IDMTBK01222729
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2564
End posion on genome 2490
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ggaagcacgT
tRNA gene sequence 
AGGTCAGTAGCTCAATTGGCAGAGCACCGCTCTCCAAAAGCGGGGGTTGTGGGTTCAATT
CCTACCTGACCTGTtg
Downstream region at tRNA end position 
agaaaaccaa
Secondary structure (Cloverleaf model)
>WENV180098005	Trp	CCA
                   T      GTtg agaaaaccaa
                     A - T
                     G - C
                     G - C
                     T - A
                     C - G
                     A - T
                     G - C          T T
                    T     C A T C C     A
      T A A        A      | | + | |     A
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTT
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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