The detailed information of tRNA gene sequence


Sequence ID>WENV180098012
Genome IDMTBK01223136
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 736
End posion on genome 811
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
ttcttttacg
tRNA gene sequence 
GGGCCCATAGCTCAATTGGCAGAGCCACCGGCTCATAACCGGCAGGTCCCTGGTTCGAAC
CCAGGTGGGCCCACCA
Downstream region at tRNA end position 
tttcacaggg
Secondary structure (Cloverleaf model)
>WENV180098012	Ile2	CAT
                   g      ACCA tttcacaggg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          C A
                    T     G G A C C     A
      T A A        A      | | | | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      C A          C     AGGTC
                    A   C
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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