The detailed information of tRNA gene sequence


Sequence ID>WENV180098019
Genome IDMTBK01223548
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 3137
End posion on genome 3213
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
aaggattcac
tRNA gene sequence 
GCGCCAGTAGCTCAGCAGGATAGAGCACTTCCCTCCTAAGGAAGGGGCCGGGGGTTCGAA
TCCCTCCTGGCGCACCA
Downstream region at tRNA end position 
gcttccattt
Secondary structure (Cloverleaf model)
>WENV180098019	Arg	CCT
                   c      ACCA gcttccattt
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | + | | |     G
    A       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGCC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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