The detailed information of tRNA gene sequence


Sequence ID>WENV180098030
Genome IDMTBK01224025
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2203
End posion on genome 2278
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ttatacttgt
tRNA gene sequence 
GCGCCTGTAACTCAGGGGATAGAGTAGCGGACTTCTAATCCGTTTGTCGAGGGTTCGAAT
CCTTCCAGGCGCGCCA
Downstream region at tRNA end position 
ccttgaatgg
Secondary structure (Cloverleaf model)
>WENV180098030	Arg	TCT
                   t      GCCA ccttgaatgg
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     C T T C C     A
      G G A        A      | | + | |     G
    G       C T C A       G A G G G     C
    G       | | | |                 T T
    A       G A G T
      T A          A     TTGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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