The detailed information of tRNA gene sequence


Sequence ID>WENV180098034
Genome IDMTBK01224061
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 788
End posion on genome 712
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gtcattatgc
tRNA gene sequence 
GGCCTGGTAGTTCAGTTGGTTAGAATGCCAGCCTGTCACGCTGGAGGTCGTGGGTTCGAG
CCCCATCCAGGTCGCCA
Downstream region at tRNA end position 
tttgctggtg
Secondary structure (Cloverleaf model)
>WENV180098034	Asp	GTC
                   c      GCCA tttgctggtg
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     G - C
                     G - C          C G
                    T     T A C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G T G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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