The detailed information of tRNA gene sequence


Sequence ID>WENV180098052
Genome IDMTBK01224616
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 679
End posion on genome 590
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gggaaatcac
tRNA gene sequence 
GGATGGGTGGCCGAGCGGTTTAAGGCACCGGTCTTGAAAACCGGCGTAGTGGCGACACTA
CCGTGGGTTCGAATCCCACCCCATCCGCCA
Downstream region at tRNA end position 
ccgcaggtcg
Secondary structure (Cloverleaf model)
>WENV180098052	Ser	TGA
                   c      GCCA ccgcaggtcg
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        A     CGTAGTGGCGACACTACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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