The detailed information of tRNA gene sequence


Sequence ID>WENV180098053
Genome IDMTBK01224624
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 557
End posion on genome 482
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tagtacgcac
tRNA gene sequence 
GGGGATGTAGCTCAGTTGGGAGAGCGCCGGCTTTGCAAGCCGGAGGTCGTCGGTTCGATC
CCGATCATCTCCACCA
Downstream region at tRNA end position 
cgagacgtcg
Secondary structure (Cloverleaf model)
>WENV180098053	Ala	TGC
                   c      ACCA cgagacgtcg
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     G - C          C T
                    T     T A G C C     A
      T G A        A      + | | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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