The detailed information of tRNA gene sequence


Sequence ID>WENV180098054
Genome IDMTBK01224647
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 276
End posion on genome 349
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
tcaaaaacat
tRNA gene sequence 
TCCTCTGTAGCTCAGTCGGTAGAGCAGTTGGCTGTTAACCAATTGGTCGTAGGTTCGAGT
CCTACCGGAGGAGCat
Downstream region at tRNA end position 
ttcctaaaaa
Secondary structure (Cloverleaf model)
>WENV180098054	Asn	GTT
                   t      GCat ttcctaaaaa
                     T - A
                     C - G
                     C - G
                     T - A
                     C - G
                     T + G
                     G - C          T G
                    T     C A T C C     A
      T G A        A      | | | | |     G
    C       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTC
                    G + T
                    T - A
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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