The detailed information of tRNA gene sequence


Sequence ID>WENV180098062
Genome IDMTBK01225291
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 4358
End posion on genome 4445
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaaaaaatcc
tRNA gene sequence 
GGTGAGGTGGGTGAGAGGCTTAAACCAGCAGTTTGCTAAACTGCCGTACGGGTAGCCGTA
CCGGGGGTTCGAATCCCCCCCTCACCGCag
Downstream region at tRNA end position 
ttggattcat
Secondary structure (Cloverleaf model)
>WENV180098062	Ser	GCT
                   c      GCag ttggattcat
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      A G A        G      | | | | |     G
    G       G T G G       G G G G G     C
    G         | | |                 T T
    C       A A C C
      T T A        A     CGTACGGGTAGCCGTACC
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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