The detailed information of tRNA gene sequence


Sequence ID>WENV180098070
Genome IDMTBK01226010
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 280
End posion on genome 355
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
agtaaagcct
tRNA gene sequence 
GGGCCTATAGCTCAGTTGGAAGAGCCACCGGCTCATAACCGGTTGGTCCCAGGTTCGAGT
CCTGGTAGGCCCACCA
Downstream region at tRNA end position 
ttaatatatt
Secondary structure (Cloverleaf model)
>WENV180098070	Ile2	CAT
                   t      ACCA ttaatatatt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     A - T          T G
                    T     G G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      A A          C     TGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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