The detailed information of tRNA gene sequence


Sequence ID>WENV180098078
Genome IDMTBK01226920
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 246
End posion on genome 320
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
tcgagtgatc
tRNA gene sequence 
GGGGCGTTAGCTCAGCCGGTCAGAGCAGCGGACTCATAATCCGTCGGTCATGGGTTCAAG
CCCCATACGCCCCACtc
Downstream region at tRNA end position 
gatccctttc
Secondary structure (Cloverleaf model)
>WENV180098078	Ile2	CAT
                   c      ACtc gatccctttc
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A          C G
                    T     T A C C C     A
      C G A        A      | | | | |     A
    C       C T C G       A T G G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     CGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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