The detailed information of tRNA gene sequence


Sequence ID>WENV180098081
Genome IDMTBK01227076
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 5970
End posion on genome 6041
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
tttttaatat
tRNA gene sequence 
CGGGCTGTAGTGTAATGGTCGCACGAGTCCTTCGGGAGGATTTAGTCCGGGTTCGAATCC
CGGCAGCCCGACaa
Downstream region at tRNA end position 
aaaacagaaa
Secondary structure (Cloverleaf model)
>WENV180098081	Pro	CGG
                   t      ACaa aaaacagaaa
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     G G C C C     A
        A A        A      | | | | |     G
      T     T G T G       C C G G G     C
      G     + | | |                 T T
      G     G C A C
        T C        G     TAGT
                    A - T
                    G + T
                    T - A
                    C - G
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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