The detailed information of tRNA gene sequence


Sequence ID>WENV180098083
Genome IDMTBK01227253
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 13688
End posion on genome 13604
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gaaattctat
tRNA gene sequence 
GTTGAGGTAGCCAAGCCTGGTATGGCGCAGGTTTGCTAAACCTGTGTCCTTCGGGACTCG
AGGGTTCAAATCCCTCCCTCAGCGCtt
Downstream region at tRNA end position 
tcaccgacag
Secondary structure (Cloverleaf model)
>WENV180098083	Ser	GCT
                   t      GCtt tcaccgacag
                     G - C
                     T + G
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | | | | |     A
    C       A C C G       G A G G G     C
    T       | | | |                 T T
    G       T G G C
      G T A        G     TGTCCTTCGGGACTC
                    C - G
                    A - T
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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