The detailed information of tRNA gene sequence


Sequence ID>WENV180098085
Genome IDMTBK01227307
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 22
End posion on genome 98
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tttctaatag
tRNA gene sequence 
GGTCCGGTAGTTCAGTTGGTTAGAATGCCAGCCTGTCACGCTGGAGGTCGAGGGTTCGAG
TCCCTTCCGGATCGCCA
Downstream region at tRNA end position 
taatagaaac
Secondary structure (Cloverleaf model)
>WENV180098085	Asp	GTC
                   g      GCCA taatagaaac
                     G - C
                     G + T
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     T T C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G A G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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