The detailed information of tRNA gene sequence


Sequence ID>WENV180098094
Genome IDMTBK01227307
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1354
End posion on genome 1430
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ttttaaatat
tRNA gene sequence 
CCGGGTGTAGCGTAGTTTGGAAGCGCACATGGTTTGGGACCATGGGGTCGGGGGTTCAAA
TCCCTCCACCCGGACCA
Downstream region at tRNA end position 
aaaatataaa
Secondary structure (Cloverleaf model)
>WENV180098094	Pro	TGG
                   t      ACCA aaaatataaa
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | + | | |     A
    T       T G C G       G G G G G     C
    T       + | | |                 T T
    G       G C G C
      G A A        A     GGGTC
                    C - G
                    A - T
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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