The detailed information of tRNA gene sequence


Sequence ID>WENV180098099
Genome IDMTBK01227395
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1632
End posion on genome 1707
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
caccacgttt
tRNA gene sequence 
GGCCCCTTCGTCTAATCGGTTAGGACACCAGCCTTTCAAGCTGGCAGCAGGGGTTCAAAT
CCCCTAGGGGTCACCA
Downstream region at tRNA end position 
tattttttgg
Secondary structure (Cloverleaf model)
>WENV180098099	Glu	TTC
                   t      ACCA tattttttgg
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     T C C C C     A
      T A A        C      | | | | |     A
    C       T C T G       A G G G G     C
    G       + | | |                 T T
    G       G G A C
      T T A        A     CAGC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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