The detailed information of tRNA gene sequence


Sequence ID>WENV180098108
Genome IDMTBK01228114
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 277
End posion on genome 367
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ggtgtcaatT
tRNA gene sequence 
GGAGAGGTGCCTGAGTGGTCGAAAGGAACTCACTGCTAACGAGTCGTAGATCTAAAAGTC
TACCGAGGGTTCGAATCCCTCCCTCTCCGTtt
Downstream region at tRNA end position 
ctttttcata
Secondary structure (Cloverleaf model)
>WENV180098108	Ser	GCT
                   T      GTtt ctttttcata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C C       G A G G G     C
    G         | | |                 T T
    T       A A G G
      C G A        A     CGTAGATCTAAAAGTCTACC
                    A - T
                    C - G
                    T - A
                    C - G
                    A   C
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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