The detailed information of tRNA gene sequence


Sequence ID>WENV180098109
Genome IDMTBK01228127
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 142
End posion on genome 217
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tatattatat
tRNA gene sequence 
GGGGGTATAGCTCAGCTGGGAGAGCGCTTGAATGGCATTCAAGAGGCCAGCGGTTCGATC
CCGCTTATCTCCACCA
Downstream region at tRNA end position 
aaacacaaag
Secondary structure (Cloverleaf model)
>WENV180098109	Ala	GGC
                   t      ACCA aaacacaaag
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     T - A
                     A - T          C T
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGCC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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