The detailed information of tRNA gene sequence


Sequence ID>WENV180098115
Genome IDMTBK01228835
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 382
End posion on genome 306
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcggacctgt
tRNA gene sequence 
GGCGAGGTAGCTCAGCTGGTTAGAGCACGGGAATCATAATCCTGGGGTCGGGGGTTCGAG
TCCCTCTCCCGCTACCA
Downstream region at tRNA end position 
attgccagca
Secondary structure (Cloverleaf model)
>WENV180098115	Met	CAT
                   t      ACCA attgccagca
                     G + T
                     G - C
                     C - G
                     G - C
                     A   C
                     G - C
                     G + T          T G
                    T     C T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    G + T
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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