The detailed information of tRNA gene sequence


Sequence ID>WENV180098116
Genome IDMTBK01228895
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1796
End posion on genome 1724
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
aagaatatat
tRNA gene sequence 
TGCGGGGTGGAGCAGAGGCAGCTCGTCGGGCTCATAACCCGAAGGTCGTAGGTTCGAATC
CTACCCCCGCTACta
Downstream region at tRNA end position 
aaatcagagt
Secondary structure (Cloverleaf model)
>WENV180098116	fMet	CAT
                   t      ACta aaatcagagt
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A T C C     A
        G A        G      | | | | |     G
      A     C G A G       G T A G G     C
      G     | | | |                 T T
      G     G C T C
        C A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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