The detailed information of tRNA gene sequence


Sequence ID>WENV180098118
Genome IDMTBK01229049
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 850
End posion on genome 776
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
cacaaatttt
tRNA gene sequence 
CGGGGTGTGGCGCAGCCTGGTAGCGCACTCGTCTGGGGGGCGAGGGGTCGCAAGTTCAAA
TCTTGTCACCCCGACaa
Downstream region at tRNA end position 
tttttcttca
Secondary structure (Cloverleaf model)
>WENV180098118	Pro	GGG
                   t      ACaa tttttcttca
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T G T T C     A
      C G A        G      + | | | |     A
    C       C G C G       G C A A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    T + G
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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