The detailed information of tRNA gene sequence


Sequence ID>WENV180098120
Genome IDMTBK01229376
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1445
End posion on genome 1519
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ggttggttgt
tRNA gene sequence 
GGGGACGTAGCTCAGGGGGAGAGCGCTTGACTCACATTCAAGAGGTCGGAGGTTCAAATC
CTCTCGTCCCCACCA
Downstream region at tRNA end position 
caagaaaacc
Secondary structure (Cloverleaf model)
>WENV180098120	Val	CAC
                   t      ACCA caagaaaacc
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T C T C C     A
        G A        A      + | | | |     A
      G     C T C G       G G A G G     C
      G     | | | |                 T T
      G     G A G C
        G A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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