The detailed information of tRNA gene sequence


Sequence ID>WENV180098134
Genome IDMTBK01230536
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 566
End posion on genome 490
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
naaactttac
tRNA gene sequence 
GGGCGCGTGGCCTAGCTGGATATGGCAGCAGCCTCCTAAGCTGCAGGTCGGGGGTTCGAA
TCCCTCCGCGCTCGCCA
Downstream region at tRNA end position 
ctcttctcct
Secondary structure (Cloverleaf model)
>WENV180098134	Arg	CCT
                   c      GCCA ctcttctcct
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    T       T C C G       G G G G G     C
    G         | | |                 T T
    G       T G G C
      A T A        A     AGGTC
                    G - C
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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