The detailed information of tRNA gene sequence


Sequence ID>WENV180098138
Genome IDMTBK01230775
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1177
End posion on genome 1090
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tgtaagttga
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGTTTAAGGAGGCGGTCTTGAAAACCGTTGAGCGGCAACGTTCC
GTGGGTTCGAATCCCACCTTCTCCGCCA
Downstream region at tRNA end position 
atttcagtga
Secondary structure (Cloverleaf model)
>WENV180098138	Ser	TGA
                   a      GCCA atttcagtga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      T T A        G     TGAGCGGCAACGTTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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