The detailed information of tRNA gene sequence


Sequence ID>WENV180098153
Genome IDMTBK01231137
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 29419
End posion on genome 29509
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gatcctcccc
tRNA gene sequence 
GGTGGCGTGTCCGAGCGGCCTAAGGAGCACGCCTCGAAAGCGTGTGACGGGTAACCCCCG
TCCGAGGGTTCAAATCCCTCCGCCACCGCCA
Downstream region at tRNA end position 
tcttcacccg
Secondary structure (Cloverleaf model)
>WENV180098153	Ser	CGA
                   c      GCCA tcttcacccg
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     A
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      C T A        G     TGACGGGTAACCCCCGTCC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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