The detailed information of tRNA gene sequence


Sequence ID>WENV180098154
Genome IDMTBK01231137
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 44948
End posion on genome 44862
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
catggccgac
tRNA gene sequence 
GGAGGATTCGCCTAGTGGCCTATGGCGCTCGCCTGGAACGCGGGTTGGGTTAATAGCCCT
CAGGGGTTCAAATCCCCTATCCTCCGCac
Downstream region at tRNA end position 
ctgtccgggg
Secondary structure (Cloverleaf model)
>WENV180098154	Ser	GGA
                   c      GCac ctgtccgggg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     T C C C C     A
      T G A        C      | | | | |     A
    G       T C C G       A G G G G     C
    G         | | |                 T T
    C       T G G C
      C T A        G     TTGGGTTAATAGCCCTC
                    C - G
                    T + G
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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