The detailed information of tRNA gene sequence


Sequence ID>WENV180098161
Genome IDMTBK01231522
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2542
End posion on genome 2468
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
tgcagccccc
tRNA gene sequence 
GGTCCGGTAGCTCAGTTGGACAGAGCAACAGCCTTCTAAGCTGTGGGTCTTGGGTTCGAA
TCCCAACCGGATCACaa
Downstream region at tRNA end position 
gcaaaagccc
Secondary structure (Cloverleaf model)
>WENV180098161	Arg	TCT
                   c      ACaa gcaaaagccc
                     G - C
                     G + T
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     A A C C C     A
      T G A        A      | | | | |     G
    T       C T C G       T T G G G     C
    G       | | | |                 T T
    G       G A G C
      A C A        A     GGGTC
                    A - T
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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