The detailed information of tRNA gene sequence


Sequence ID>WENV180098166
Genome IDMTBK01231716
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 521
End posion on genome 608
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gccgctattt
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTTGAATGCGGCGGTCTTGAAAACCGTTTCTCGACTTATCGGG
ACGGGGGTTCAAATCCCTCCCTCTCCGCaa
Downstream region at tRNA end position 
atgaacgtgg
Secondary structure (Cloverleaf model)
>WENV180098166	Ser	TGA
                   t      GCaa atgaacgtgg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     A
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        G     TTCTCGACTTATCGGGAC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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