The detailed information of tRNA gene sequence


Sequence ID>WENV180098171
Genome IDMTBK01231937
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 11247
End posion on genome 11336
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgaagtttgc
tRNA gene sequence 
GGAGAGGTCGCCTAGAGGCCGAGGGCGACGGTTTGCTAAACCGTTAAGGGGTAACTCCCT
TCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tctgaaatgt
Secondary structure (Cloverleaf model)
>WENV180098171	Ser	GCT
                   c      GCCA tctgaaatgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      A G A        C      | | | | |     G
    G       T C C G       G A G G G     C
    G       + | | |                 T T
    C       G G G C
      C G A        G     TAAGGGGTAACTCCCTTC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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