The detailed information of tRNA gene sequence


Sequence ID>WENV180098174
Genome IDMTBK01231937
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 12117
End posion on genome 12206
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gcatttaccg
tRNA gene sequence 
GGAGGGGTGTCGGAGCGGTTGAACGAGCCCGCCTCGAAAGCGGGTAGGCGTGAGAGCGCC
TCGTGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
agatggtcca
Secondary structure (Cloverleaf model)
>WENV180098174	Ser	CGA
                   g      GCCA agatggtcca
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G G C T       G T G G G     C
    G         | | |                 T T
    T       A C G A
      T G A        G     TAGGCGTGAGAGCGCCTC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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